5MZ7
Crystal Structure of the third PDZ domain from the synaptic protein PSD-95 with incorporated Azidohomoalanine
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SLS BEAMLINE X06DA |
| Synchrotron site | SLS |
| Beamline | X06DA |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-05-27 |
| Detector | DECTRIS PILATUS 2M |
| Wavelength(s) | 1.00004 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 153.207, 34.078, 72.244 |
| Unit cell angles | 90.00, 101.40, 90.00 |
Refinement procedure
| Resolution | 47.086 - 1.530 |
| R-factor | 0.1851 |
| Rwork | 0.184 |
| R-free | 0.22060 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1bfe |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.736 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 47.090 | 1.620 |
| High resolution limit [Å] | 1.530 | 1.530 |
| Rmerge | 0.059 | 0.577 |
| Number of reflections | 54545 | |
| <I/σ(I)> | 11.7 | 2.1 |
| Completeness [%] | 97.6 | 96.3 |
| Redundancy | 2.3 | 2.2 |
| CC(1/2) | 0.999 | 0.831 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 291 | 1.1 M sodium citrate, 0.1 M HEPES |
