5MY6
Crystal structure of a HER2-Nb complex
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SLS BEAMLINE X06SA |
| Synchrotron site | SLS |
| Beamline | X06SA |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-12-01 |
| Detector | DECTRIS PILATUS3 S 6M |
| Wavelength(s) | 0.999 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 66.520, 113.520, 137.430 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 47.794 - 2.246 |
| R-factor | 0.1866 |
| Rwork | 0.185 |
| R-free | 0.22010 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1s78 |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.873 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.10_2155) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 47.794 | 2.326 |
| High resolution limit [Å] | 2.246 | 2.246 |
| Rmeas | 0.103 | 0.709 |
| Number of reflections | 49524 | 4790 |
| <I/σ(I)> | 9.65 | 1.7 |
| Completeness [%] | 98.1 | 96.6 |
| Redundancy | 3.3 | 3.2 |
| CC(1/2) | 0.995 | 0.664 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.25 | 293.15 | 100 mM HEPES pH 7.25, 10% 2-propanol, 22% PEG 4000 |






