5MXW
Crystal structure of yellow lupin LLPR-10.2B protein in complex with melatonin and trans-zeatin.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX II BEAMLINE I911-2 |
Synchrotron site | MAX II |
Beamline | I911-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-12-15 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.0000000 |
Spacegroup name | P 65 |
Unit cell lengths | 74.400, 74.400, 67.310 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 46.590 - 1.570 |
R-factor | 0.1858 |
Rwork | 0.185 |
R-free | 0.20590 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2qim |
RMSD bond length | 0.019 |
RMSD bond angle | 1.866 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.590 | 46.590 | 1.660 |
High resolution limit [Å] | 1.570 | 4.690 | 1.570 |
Rmerge | 0.037 | 0.022 | 0.744 |
Rmeas | 0.041 | 0.025 | 0.834 |
Total number of observations | 147160 | ||
Number of reflections | 29524 | 1132 | 4688 |
<I/σ(I)> | 22.2 | 63.86 | 2.01 |
Completeness [%] | 99.7 | 99 | 98.4 |
Redundancy | 4.984 | 4.666 | 4.892 |
CC(1/2) | 0.999 | 0.999 | 0.789 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.3 | 292 | 1.4 M sodium citrate pH 6.3 |