5MX2
Photosystem II depleted of the Mn4CaO5 cluster at 2.55 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-05-12 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.91841 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 116.326, 219.617, 304.043 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.652 - 2.197 |
R-factor | 0.2139 |
Rwork | 0.211 |
R-free | 0.25950 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4pj0 |
RMSD bond length | 0.013 |
RMSD bond angle | 1.179 |
Data reduction software | XDS (VERSION Oct 15, 2015) |
Data scaling software | XDS (VERSION Oct 15, 2015) |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.700 | 2.276 |
High resolution limit [Å] | 2.197 | 2.197 |
Rmerge | 0.250 | 3.270 |
Number of reflections | 364603 | 25404 |
<I/σ(I)> | 9.34 | 0.44 |
Completeness [%] | 93.0 | 65 |
Redundancy | 11.2 | 5.2 |
CC(1/2) | 0.993 | 0.132 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 7.5 | 291 | equal volumes of buffer: 0.1 M Tris-HCl pH 7.5, 0.1 M (NH4)2SO4, 14-18 % PEG 5000 MME and protein: 2 mM chlorophyll equivalent of PSII in C12E8 detergent, post crystallisation treatment |