5MWC
Crystal structure of the genetically-encoded green calcium indicator NTnC in its calcium bound state
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-3 |
Synchrotron site | ESRF |
Beamline | MASSIF-3 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-09-26 |
Detector | DECTRIS EIGER R 4M |
Wavelength(s) | 0.9677 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 82.100, 82.100, 157.470 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 72.800 - 2.450 |
R-factor | 0.24259 |
Rwork | 0.239 |
R-free | 0.30971 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4hvf |
RMSD bond length | 0.011 |
RMSD bond angle | 1.860 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MoRDa |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 72.800 | 50.000 | 2.500 |
High resolution limit [Å] | 2.450 | 10.000 | 2.450 |
Rmerge | 0.062 | 0.021 | 0.973 |
Rmeas | 0.066 | 0.023 | 1.026 |
Number of reflections | 20432 | 313 | 1187 |
<I/σ(I)> | 23.84 | 71.65 | 2.3 |
Completeness [%] | 99.5 | 85.3 | 100 |
Redundancy | 8.933 | 7.479 | 9.387 |
CC(1/2) | 0.999 | 0.999 | 0.734 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.8 | 286 | 0.1M Sodium acetate, 22.5% PEG3350, 10% PEG400, 5% DMSO. |