Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5MVJ

Structure of DC8E8 Fab at pH 6.5 crystallized in space-group P1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]100
Detector technologyCCD
Collection date2008-08-28
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)1.0000
Spacegroup nameP 1
Unit cell lengths61.220, 82.260, 89.310
Unit cell angles92.32, 95.47, 89.82
Refinement procedure
Resolution34.370 - 2.500
R-factor0.2219
Rwork0.219
R-free0.27210
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4OZ4
RMSD bond length0.012
RMSD bond angle1.616
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]34.37034.3702.560
High resolution limit [Å]2.50011.1802.500
Rmerge0.0820.0250.445
Rmeas0.1130.0350.614
Number of reflections580195964296
<I/σ(I)>9.3124.51.96
Completeness [%]96.788.896.7
Redundancy2.0672.0492.058
CC(1/2)0.9900.9970.607
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.529520% PEG 8000, 0.1 M Na-cacodylate, 0.2 M Mg-acetate

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon