5MS8
Crystal structure of the legionella pneumophila effector protein RavZ_1-487
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-11-26 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9780 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 221.270, 221.270, 73.270 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.047 - 2.850 |
R-factor | 0.2036 |
Rwork | 0.201 |
R-free | 0.24950 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5cqc |
RMSD bond length | 0.009 |
RMSD bond angle | 1.452 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.050 | 2.950 |
High resolution limit [Å] | 2.850 | 2.850 |
Rmerge | 0.216 | 1.927 |
Number of reflections | 21565 | |
<I/σ(I)> | 14.09 | 1.85 |
Completeness [%] | 100.0 | 100 |
Redundancy | 26.7 | 27.9 |
CC(1/2) | 0.998 | 0.134 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 277.15 | 16% PEG3350, 0.2 M BaCl2 and 0.1 M MES |