5MLO
Crystal structure of human PCNA in complex with ZRANB3 PIP box peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-02-21 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.1402 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 68.136, 86.802, 156.679 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 78.340 - 1.960 |
R-factor | 0.21363 |
Rwork | 0.211 |
R-free | 0.25933 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1vym |
RMSD bond length | 0.010 |
RMSD bond angle | 1.401 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0103) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 78.340 | 2.010 |
High resolution limit [Å] | 1.960 | 1.960 |
Rmerge | 0.084 | 1.763 |
Number of reflections | 67566 | |
<I/σ(I)> | 20.2 | 1.5 |
Completeness [%] | 100.0 | 100 |
Redundancy | 13 | 13 |
CC(1/2) | 0.999 | 0.566 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 100 mM NaCl + 8% (v/v) DMSO + 31% pentaerythitol propoxylate (5/4 PO/OH) |