Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5MKP

Non redox thiolation in transfer RNAs occuring via sulfur activation by a [4Fe-4S] cluster

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 2
Synchrotron siteSOLEIL
BeamlinePROXIMA 2
Temperature [K]80
Detector technologyPIXEL
Collection date2016-04-08
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.979338
Spacegroup nameP 43 21 2
Unit cell lengths70.120, 70.120, 127.900
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.250 - 2.500
R-factor0.195
Rwork0.193
R-free0.24500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3vrh
RMSD bond length0.009
RMSD bond angle1.000
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHENIX
Refinement softwareBUSTER (2.10.2)
Data quality characteristics
 Outer shell
Low resolution limit [Å]2.650
High resolution limit [Å]2.500
Rmerge2.770
<I/σ(I)>1
Completeness [%]99.7
Redundancy13.9
CC(1/2)0.290
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP9298Anaerobic conditions (Glovebox)

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon