5MIX
Extracellular domain of human CD83 - trigonal crystal form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-05-30 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.918409 |
Spacegroup name | P 3 2 1 |
Unit cell lengths | 62.942, 62.942, 40.064 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 40.060 - 1.701 |
R-factor | 0.1912 |
Rwork | 0.188 |
R-free | 0.21640 |
RMSD bond length | 0.006 |
RMSD bond angle | 1.088 |
Data reduction software | XDS |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.060 | 1.800 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.046 | 0.851 |
Number of reflections | 10348 | |
<I/σ(I)> | 23.8 | 2.6 |
Completeness [%] | 99.9 | 99.9 |
Redundancy | 9.9 | 9.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.4 microliter protein (39 mg/ml in 50 mM Tris-HCl (pH 8.0) buffer) were mixed with 0.2 microliter reservoir solution (1 M ammonium sulfate, 0.1 M HEPES (pH 7.0), 0.5% w/v polyethylene glycol (PEG) 8000) and equilibrated against 70 microliter of reservoir solution |