5MI2
The study of the X-ray induced enzymatic reduction of molecular oxygen to water for laccase from Steccherinum murashkinskyi.The 10-th structure of the series with total exposition time 273 min.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE X13 |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | X13 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-11-27 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.81230 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 56.380, 84.410, 112.510 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 67.520 - 1.350 |
R-factor | 0.13148 |
Rwork | 0.131 |
R-free | 0.14752 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5mew |
RMSD bond length | 0.020 |
RMSD bond angle | 1.959 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 67.520 | 2.200 | 1.400 |
High resolution limit [Å] | 1.350 | 1.900 | 1.350 |
Rmerge | 0.046 | 0.045 | 0.281 |
Number of reflections | 116941 | ||
<I/σ(I)> | 19.78 | 26.82 | 5.07 |
Completeness [%] | 98.8 | 99.1 | 98.6 |
Redundancy | 3.1 | 3.1 | 3 |
CC(1/2) | 0.999 | 0.998 | 0.912 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4 | 294 | Protein solution (12mg/ml, 002M K-phosphate buffer, pH 6.5). Reservoir solution (0.1M citrate-phosphate buffer pH4.0, 0.2M ammonium acetat, 25% PEG 4000 |