Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5MDH

CRYSTAL STRUCTURE OF TERNARY COMPLEX OF PORCINE CYTOPLASMIC MALATE DEHYDROGENASE ALPHA-KETOMALONATE AND TNAD AT 2.4 ANGSTROMS RESOLUTION

Experimental procedure
Source typeSYNCHROTRON
Source detailsSRS BEAMLINE PX7.2
Synchrotron siteSRS
BeamlinePX7.2
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date1996-08
DetectorMARRESEARCH
Spacegroup nameP 21 21 2
Unit cell lengths85.700, 144.432, 59.226
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution15.000 - 2.400
R-factor0.199

*

Rwork0.199
R-free0.25378

*

Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4mdh
RMSD bond length0.010
RMSD bond angle0.034
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]15.0002.510
High resolution limit [Å]2.4002.400
Rmerge0.0930.320
Number of reflections26268
<I/σ(I)>12.343.72
Completeness [%]89.391.6
Redundancy3.963.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

5.6pH 5.6
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirammonium acetate0.15 (mM)
21reservoirPEG400016 (%(v/v))

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon