5MAZ
STRUCTURE OF THE LECB LECTIN FROM PSEUDOMONAS AERUGINOSA STRAIN PA14 IN COMPLEX WITH 3-Thiophenesulfonamide-2,5-dimethyl-N-methyl-beta-L-fucopyranoside
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-05-14 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.8726 |
Spacegroup name | P 61 |
Unit cell lengths | 49.881, 49.881, 288.753 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 37.070 - 1.450 |
R-factor | 0.12434 |
Rwork | 0.123 |
R-free | 0.14196 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5a6q |
RMSD bond length | 0.016 |
RMSD bond angle | 1.788 |
Data reduction software | XDS (2016) |
Data scaling software | Aimless (0.5.27) |
Phasing software | PHASER (2.6.1) |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 37.070 | 1.470 |
High resolution limit [Å] | 1.450 | 1.450 |
Rmerge | 0.057 | 0.308 |
Number of reflections | 71656 | |
<I/σ(I)> | 27.1 | 7.6 |
Completeness [%] | 100.0 | 100 |
Redundancy | 11.3 | 11 |
CC(1/2) | 1.000 | 0.980 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 292 | 22% PEG8K 50 mM AMSO4 0.1M Tris-HCl pH 8.5 |