5M92
PCE reductive dehalogenase from S. multivorans in complex with 2,4-dibromophenol
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-02-03 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.91841 |
Spacegroup name | P 41 |
Unit cell lengths | 73.944, 73.944, 185.109 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.375 - 1.785 |
R-factor | 0.1493 |
Rwork | 0.149 |
R-free | 0.17800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4uqu |
RMSD bond length | 0.008 |
RMSD bond angle | 0.928 |
Data reduction software | XDS (November 3, 2014) |
Data scaling software | XDS (November 3, 2014) |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.400 | 1.849 |
High resolution limit [Å] | 1.785 | 1.785 |
Rmerge | 0.090 | 0.951 |
Number of reflections | 93436 | |
<I/σ(I)> | 22 | 2.4 |
Completeness [%] | 99.5 | 94.94 |
Redundancy | 13.56 | 13.41 |
CC(1/2) | 0.999 | 0.752 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 291 | 15 percent PEG 3350, 200 mM sodium malonate, 2 percent benzamidineHCl, and 50 mM TrisHCl, pH 7.5 under an atmosphere of 95 percent N2, 5 percent H2 and less than 10 ppm oxygen |