Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5M79

Blood group synthase AAGlyB in complex with UMP and cryoprotected with glycerol

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyPIXEL
Collection date2013-04-01
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97857
Spacegroup nameC 2 2 21
Unit cell lengths52.606, 148.717, 79.530
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution42.083 - 1.300
R-factor0.138
Rwork0.137
R-free0.16070
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3zgg
RMSD bond length0.013
RMSD bond angle1.241
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10_2155: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]42.0831.370
High resolution limit [Å]1.3001.300
Rmerge0.714
Number of reflections75731
<I/σ(I)>8.7
Completeness [%]98.696.3
Redundancy4.23.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7293MOPS buffer, Manganese chloride,ammonium sulfate, PEG 3350

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon