5M4A
Neutral trehalase Nth1 from Saccharomyces cerevisiae in complex with trehalose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-10-15 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.918 |
Spacegroup name | P 62 2 2 |
Unit cell lengths | 185.769, 185.769, 118.799 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.878 - 2.900 |
R-factor | 0.2349 |
Rwork | 0.234 |
R-free | 0.25170 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Preliminary model from SAD |
RMSD bond length | 0.010 |
RMSD bond angle | 0.835 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX ((1.10.1_2155-000)) |
Refinement software | PHENIX ((1.10.1_2155-000)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.880 | 3.070 |
High resolution limit [Å] | 2.900 | 2.900 |
Rmerge | 0.203 | 2.315 |
Number of reflections | 27347 | |
<I/σ(I)> | 14.39 | 1.14 |
Completeness [%] | 99.8 | 99.3 |
Redundancy | 10.87 | |
CC(1/2) | 0.997 | 0.456 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 5.6 | 291.15 | Sodium Citrate, Ammonium Sulfate, Lithium Sulfate, Trehalose |