5M43
Crystal structure of Yvh1 phosphatase domain from Chaetomium thermophilum
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-04-30 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 0.8726 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 88.758, 88.758, 53.079 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.379 - 1.646 |
R-factor | 0.1644 |
Rwork | 0.163 |
R-free | 0.18680 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1wrm |
RMSD bond length | 0.017 |
RMSD bond angle | 1.373 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.17) |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.10.1_2155: ???) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.550 | 1.670 |
High resolution limit [Å] | 1.646 | 1.650 |
Rmerge | 0.056 | 0.620 |
Number of reflections | 25830 | |
<I/σ(I)> | 20.6 | |
Completeness [%] | 98.5 | 93.5 |
Redundancy | 8.6 | 8.2 |
CC(1/2) | 0.999 | 0.916 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.2 M LiNO3 20% PEG3350 |