5M21
Crystal structure of hydroquinone 1,2-dioxygenase from Sphingomonas sp. TTNP3 with 4-hydroxybenzoate bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ELETTRA BEAMLINE 5.2R |
Synchrotron site | ELETTRA |
Beamline | 5.2R |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-04-24 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 88.782, 124.869, 92.371 |
Unit cell angles | 90.00, 105.15, 90.00 |
Refinement procedure
Resolution | 29.800 - 1.990 |
R-factor | 0.1824 |
Rwork | 0.179 |
R-free | 0.24190 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4zxa |
RMSD bond length | 0.015 |
RMSD bond angle | 1.785 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.856 | 29.856 | 2.110 |
High resolution limit [Å] | 1.990 | 5.860 | 1.990 |
Rmerge | 0.117 | 0.059 | 0.583 |
Number of reflections | 130301 | ||
<I/σ(I)> | 8.86 | 22.96 | 2.45 |
Completeness [%] | 97.7 | 98.8 | 88.9 |
Redundancy | 4.32 | ||
CC(1/2) | 0.994 | 0.995 | 0.846 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.5 | 296 | 14% PEG 3350, 0.35 M MgCl2 and 0.1 M Mes |