5LYV
The crystal structure of 7SK 5'-hairpin - Osmium derivative
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-11-11 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.13956 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 47.120, 47.740, 68.940 |
Unit cell angles | 90.00, 105.20, 90.00 |
Refinement procedure
Resolution | 40.000 - 2.350 |
R-factor | 0.2001 |
Rwork | 0.199 |
R-free | 0.23170 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 5lys |
RMSD bond length | 0.010 |
RMSD bond angle | 0.950 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | BUSTER-TNT (2.10.2) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.410 | |
High resolution limit [Å] | 2.350 | 10.510 | 2.350 |
Rmerge | 0.062 | 0.028 | 0.458 |
Rmeas | 0.083 | 0.037 | 0.644 |
Total number of observations | 41939 | ||
Number of reflections | 22741 | 235 | 1368 |
<I/σ(I)> | 7.37 | 22.45 | 1.3 |
Completeness [%] | 93.4 | 83.9 | 75.3 |
Redundancy | 1.8 | ||
CC(1/2) | 0.995 | 0.996 | 0.774 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 30% PEG 1000, 50 mM Tris pH 7.5, 50 to 75 mM NaCl, 50 mM MgCl2, 3% DMSO |