5LTK
Crystal structure of the Prp43-ADP-BeF3 complex (in hexagonal space group)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-10-26 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97625 |
Spacegroup name | P 65 |
Unit cell lengths | 184.342, 184.342, 82.317 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 92.171 - 3.241 |
R-factor | 0.1846 |
Rwork | 0.182 |
R-free | 0.21660 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5lta |
RMSD bond length | 0.003 |
RMSD bond angle | 0.672 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 92.171 | 3.390 |
High resolution limit [Å] | 3.240 | 3.240 |
Rmerge | 0.098 | 0.762 |
Number of reflections | 25305 | |
<I/σ(I)> | 14.65 | 2.26 |
Completeness [%] | 98.8 | 94.9 |
Redundancy | 4 | 3.59 |
CC(1/2) | 0.998 | 0.638 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 40 % (v/v) pentaerythritol propoxylate (5/4 PO/OH), 6 % (v/v) ethanol, 16 % (v/v) glycerine and 100 mM Tris/HCl pH 8.0 |