5LTJ
Crystal structure of the Prp43-ADP-BeF3 complex (in orthorhombic space group)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-04-16 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97625 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 88.826, 105.637, 119.050 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 67.986 - 1.780 |
R-factor | 0.177 |
Rwork | 0.177 |
R-free | 0.19890 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5lta |
RMSD bond length | 0.004 |
RMSD bond angle | 0.870 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 79.020 | 1.890 |
High resolution limit [Å] | 1.780 | 1.780 |
Rmerge | 0.072 | 1.235 |
Number of reflections | 107277 | |
<I/σ(I)> | 14.88 | 1.64 |
Completeness [%] | 99.6 | 98.8 |
Redundancy | 4.71 | 4.66 |
CC(1/2) | 0.999 | 0.619 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | 35 % (v/v) MPD, 1.67 % (w/v) PEG 4000 and 100 mM Na HEPES pH 7.0 |