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5LSM

Crystal structure of nitronate monooxygenase (SO_0471) from Shewanella oneidensis MR-1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2013-06-24
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97833
Spacegroup nameP 1
Unit cell lengths76.001, 99.911, 108.558
Unit cell angles95.31, 106.23, 91.62
Refinement procedure
Resolution34.160 - 2.500
R-factor0.18866
Rwork0.185
R-free0.25572
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2gjl
RMSD bond length0.008
RMSD bond angle1.066
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0103)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]34.1602.540
High resolution limit [Å]2.5002.500
Rmerge0.0670.343
Number of reflections99971
<I/σ(I)>10.7
Completeness [%]95.0
Redundancy1.8
CC(1/2)0.9980.670
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2980.5 M potassium dihydrogen phosphate and 20 % w/v PEG 8000

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PDB entries from 2024-07-17

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