Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5LSG

PPARgamma complex with the betulinic acid

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM14
Synchrotron siteESRF
BeamlineBM14
Temperature [K]100
Detector technologyCCD
Collection date2016-03-30
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.9537
Spacegroup nameC 1 2 1
Unit cell lengths92.860, 60.850, 118.030
Unit cell angles90.00, 102.48, 90.00
Refinement procedure
Resolution45.683 - 2.000
R-factor0.2286
Rwork0.227
R-free0.26430
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3d6d
RMSD bond length0.009
RMSD bond angle1.265
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareAMoRE
Refinement softwarePHENIX (1.8.4_1496)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.200
High resolution limit [Å]2.0002.000
Rmerge0.0300.467
Number of reflections43045
<I/σ(I)>29.253.74
Completeness [%]98.597.8
Redundancy5.285.32
CC(1/2)1.0000.924
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8290reservoir: 0.8M NACITRATE, 0.15M TRIS, PH8.0. The crystals were soaked for one week in a storage solution (1.2 M Na Citrate, 0.15M Tris, pH 8.0) containing the ligand BA (0.5 mM).

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon