5LR3
RNA duplex has central consecutive GA pairs flanked by G-U basepairs
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-02-05 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9796 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 33.300, 33.300, 120.910 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.168 - 1.650 |
R-factor | 0.2484 |
Rwork | 0.247 |
R-free | 0.26560 |
Structure solution method | SAD |
RMSD bond length | 0.001 |
RMSD bond angle | 2.499 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX ((dev_2481: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.170 | 1.690 |
High resolution limit [Å] | 1.650 | 1.650 |
Rmerge | 0.063 | 1.900 |
Number of reflections | 8761 | |
<I/σ(I)> | 16.8 | 1 |
Completeness [%] | 98.5 | 95.2 |
Redundancy | 9.9 | 10.2 |
CC(1/2) | 1.000 | 0.600 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | 0.015 M Magnesium Acetate, 0.05 M Sodium Cacodylate pH 6.0, 1.7 M Ammonium Sulfate |