5LM5
Structure of C-terminal domain from S. cerevisiae Pat1 decapping activator bound to Dcp2 HLM2 peptide (region 435-451)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-07-03 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97533 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 98.280, 115.960, 122.010 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.140 - 2.600 |
R-factor | 0.256 |
Rwork | 0.256 |
R-free | 0.26800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ogp |
RMSD bond length | 0.010 |
RMSD bond angle | 1.120 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | BUSTER-TNT (2.10.2) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.750 | |
High resolution limit [Å] | 2.600 | 10.000 | 2.600 |
Rmerge | 0.134 | 0.047 | 1.391 |
Number of reflections | 21634 | ||
<I/σ(I)> | 6.52 | 21.73 | 1.01 |
Completeness [%] | 99.1 | 96.8 | 98.9 |
Redundancy | 4.3 | ||
CC(1/2) | 0.996 | 0.996 | 0.542 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 297.15 | 0.2 M MgCl2 20%PEG 3350 |