Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5LLF

Structure of Polyphosphate Kinase 2 mutant D117N from Francisella tularensis with polyphosphate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2016-01-21
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.97949
Spacegroup nameC 2 2 21
Unit cell lengths73.440, 165.940, 255.300
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution69.500 - 2.310
R-factor0.2002
Rwork0.198
R-free0.24720
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4yeg
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 Overall
Low resolution limit [Å]69.570
High resolution limit [Å]2.310
Rmerge0.103
Number of reflections68434
<I/σ(I)>13
Completeness [%]99.7
Redundancy5.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293.1532.5 % MPD/PEG100/PEG3350, 0.1 M Bicine/Trizma base pH 8.5, 0.09 M NPS, 0.5 mM polyP, 2.5 mM AMPPCH2P

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon