Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5LKD

Crystal structure of the Xi glutathione transferase ECM4 from Saccharomyces cerevisiae in complex with glutathione

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM30A
Synchrotron siteESRF
BeamlineBM30A
Temperature [K]100
Detector technologyCCD
Collection date2015-06-29
DetectorADSC QUANTUM 315r
Wavelength(s)0.979767
Spacegroup nameP 1 21 1
Unit cell lengths55.440, 82.440, 80.580
Unit cell angles90.00, 95.31, 90.00
Refinement procedure
Resolution47.582 - 1.680
R-factor0.161
Rwork0.159
R-free0.20030
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3ppu
RMSD bond length0.019
RMSD bond angle1.456
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX ((1.10.1_2155: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.5901.720
High resolution limit [Å]1.6801.680
Rmerge0.055
Number of reflections78066
<I/σ(I)>17.91.9
Completeness [%]95.074.3
Redundancy3.83.7
CC(1/2)0.9900.760
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1MICROBATCH27720% (w/v) PEG 2000 MME, 0.1 M Tris pH 7.0

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon