5LHS
The ligand free catalytic domain of murine urokinase-type plasminogen activator
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX II BEAMLINE I911-2 |
Synchrotron site | MAX II |
Beamline | I911-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-10-01 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 1.04 |
Spacegroup name | P 32 |
Unit cell lengths | 194.700, 194.700, 37.000 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.683 - 3.047 |
R-factor | 0.2156 |
Rwork | 0.213 |
R-free | 0.25980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4dva |
RMSD bond length | 0.005 |
RMSD bond angle | 1.174 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.680 | 3.150 |
High resolution limit [Å] | 3.050 | 3.050 |
Rmerge | 0.097 | 0.661 |
Number of reflections | 29462 | |
<I/σ(I)> | 12.91 | |
Completeness [%] | 98.6 | |
Redundancy | 3.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.4 | 288 | 100 mM HEPES, 1.8 M LisSO4 |