5LDJ
Crystal structure of E.coli LigT complexed with phosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX II BEAMLINE I911-2 |
Synchrotron site | MAX II |
Beamline | I911-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-06-12 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 1.04 |
Spacegroup name | P 1 |
Unit cell lengths | 54.730, 63.520, 67.370 |
Unit cell angles | 106.26, 106.14, 103.06 |
Refinement procedure
Resolution | 22.956 - 2.802 |
R-factor | 0.2218 |
Rwork | 0.218 |
R-free | 0.25800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDBid:5LDI |
RMSD bond length | 0.003 |
RMSD bond angle | 0.705 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.880 |
High resolution limit [Å] | 2.800 | 2.800 |
Rmerge | 0.126 | 0.942 |
Number of reflections | 18651 | |
<I/σ(I)> | 7.21 | 1.02 |
Completeness [%] | 95.7 | 94.3 |
Redundancy | 2.21 | 2.2 |
CC(1/2) | 0.978 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 0.1 M Tris-HCl pH 7.5, 0.2 M MgCl2, 18% (w/v) PEG 8000 |