5L8S
The crystal structure of a cold-adapted acylaminoacyl peptidase reveals a novel quaternary architecture based on the arm-exchange mechanism
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-4 |
Synchrotron site | ESRF |
Beamline | ID14-4 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-12-11 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.93929 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 148.080, 151.100, 191.230 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 63.480 - 2.500 |
R-factor | 0.21386 |
Rwork | 0.212 |
R-free | 0.24776 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ve6 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.282 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 63.740 | 2.640 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.128 | 0.399 |
Number of reflections | 148344 | |
<I/σ(I)> | 10.8 | 4.5 |
Completeness [%] | 100.0 | 100 |
Redundancy | 5.6 | 5.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 277 | 30% PEG 400, 0.1 M Na-Hepes (pH 7.5), and 0.2 M MgCl2 |