Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5KVZ

T. danielli thaumatin at 100K, Data set 3

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL14-1
Synchrotron siteSSRL
BeamlineBL14-1
Temperature [K]100
Detector technologyCCD
Collection date2014-06-13
DetectorMARMOSAIC 325 mm CCD
Wavelength(s)1.21549
Spacegroup nameP 41 21 2
Unit cell lengths57.671, 57.671, 151.176
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution53.880 - 1.592
R-factor0.1708
Rwork0.169
R-free0.20400
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1rqw
RMSD bond length0.020
RMSD bond angle2.006
Data reduction softwareXDS
Data scaling softwareSCALA (3.3.20)
Refinement softwareREFMAC (5.8.0151)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]31.70031.7001.680
High resolution limit [Å]1.5925.0401.592
Rmerge0.0221.540
Rmeas0.0560.0261.829
Rpim0.0270.0130.963
Total number of observations142507474416074
Number of reflections34819
<I/σ(I)>13.544.40.8
Completeness [%]99.198.695.2
Redundancy4.13.83.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.3291CRYSTALS WERE GROWN BY MIXING EQUAL VOLUMES OF WELL SOLUTION (0.9 M SODIUM/POTASSIUM TARTRATE, 0.2 M AMMONIUM SULFATE, 15% GLYCEROL, 25% PEG 8000, 100 MM HEPES PH 7.3) AND PROTEIN (35 MG/ML) IN THE SITTING DROP FORMAT.

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon