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5KTT

Crystal structure of Pyrococcus horikoshii quinolinate synthase (NadA) with bound L-malate and Fe4S4 cluster

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyCCD
Collection date2013-04-05
DetectorADSC QUANTUM 315
Wavelength(s)0.97925
Spacegroup nameP 1 21 1
Unit cell lengths47.333, 54.639, 55.613
Unit cell angles90.00, 90.79, 90.00
Refinement procedure
Resolution29.943 - 1.500
R-factor0.1485
Rwork0.146
R-free0.19260
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5ktn
RMSD bond length0.011
RMSD bond angle1.846
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX ((1.10_2155: 000))
Refinement softwarePHENIX ((1.10_2155: 000))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]35.0001.550
High resolution limit [Å]1.5001.500
Rmerge0.0460.484
Number of reflections44361
<I/σ(I)>15.92.7
Completeness [%]97.399.9
Redundancy2.92.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP296210 mM ammonium chloride, 8 - 15% polyethylene glycol 4000, and 40 mM HEPES, pH 5.5 - 7.5. L-malic acid, pH 5.6, was added to the protein solution to a final concentration of 10 mM

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