5KTS
Crystal structure of Pyrococcus horikoshii quinolinate synthase (NadA) with bound citraconate and Fe4S4 cluster
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CHESS BEAMLINE F1 |
Synchrotron site | CHESS |
Beamline | F1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-06-18 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.91810 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 47.293, 52.476, 55.588 |
Unit cell angles | 90.00, 111.86, 90.00 |
Refinement procedure
Resolution | 21.947 - 1.340 |
R-factor | 0.1508 |
Rwork | 0.149 |
R-free | 0.18740 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 5ktn |
RMSD bond length | 0.011 |
RMSD bond angle | 1.801 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX ((1.10_2155: 000)) |
Refinement software | PHENIX ((1.10_2155: 000)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 22.000 | 1.390 |
High resolution limit [Å] | 1.340 | 1.340 |
Rmerge | 0.077 | 0.421 |
Number of reflections | 55357 | |
<I/σ(I)> | 12.8 | 2.7 |
Completeness [%] | 97.3 | 86.8 |
Redundancy | 3.3 | 2.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 296 | 210 mM ammonium chloride, 8 - 15% (w/v) polyethylene glycol 4000, and 40 mM HEPES, pH 5.5 - 7.5. Citraconic acid, pH 6.0, was added to the cryopreservation solution to a final concentration of 7 mM |