5KQ3
Crystal structure of the D141A/Q233E variant of catalase-peroxidase from B. pseudomallei
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-10-09 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97944 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 101.044, 114.028, 174.505 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.728 - 1.850 |
R-factor | 0.1609 |
Rwork | 0.159 |
R-free | 0.19500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1MWV |
RMSD bond length | 0.023 |
RMSD bond angle | 2.014 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.21) |
Refinement software | REFMAC (5.8.0151) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.728 | 47.728 | 1.950 |
High resolution limit [Å] | 1.850 | 5.850 | 1.850 |
Rmerge | 0.028 | 0.487 | |
Rmeas | 0.088 | ||
Rpim | 0.042 | ||
Total number of observations | 559139 | ||
Number of reflections | 152779 | ||
<I/σ(I)> | 9.8 | 21.4 | 1.6 |
Completeness [%] | 89.3 | 80.2 | 93.5 |
Redundancy | 3.7 | 3.9 | 3.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.1 | 293 | MPD |