5KMA
Human Histidine Triad Nucleotide Binding Protein 1 (hHint1) H112N mutant nucleoside D-Trp phosphoramidate substrate complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2015-09-24 |
Detector | RDI CMOS_8M |
Wavelength(s) | 1.000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 78.069, 46.461, 64.134 |
Unit cell angles | 90.00, 94.75, 90.00 |
Refinement procedure
Resolution | 39.890 - 1.550 |
R-factor | 0.1565 |
Rwork | 0.155 |
R-free | 0.18630 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3tw2 |
RMSD bond length | 0.006 |
RMSD bond angle | 1.198 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.9) |
Phasing software | PHASER (2.6.0) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 39.890 | 39.890 | 1.580 |
High resolution limit [Å] | 1.550 | 8.490 | 1.550 |
Rmerge | 0.065 | 0.027 | 0.404 |
Rmeas | 0.033 | 0.478 | |
Rpim | 0.018 | 0.253 | |
Total number of observations | 781 | 5656 | |
Number of reflections | 33342 | ||
<I/σ(I)> | 14.6 | 36.8 | 2.9 |
Completeness [%] | 99.9 | 98.5 | 100 |
Redundancy | 3.5 | 3.4 | 3.5 |
CC(1/2) | 0.998 | 0.997 | 0.845 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.4 | 293 | 100 mM MES, 32% PEG 8000 |