5KL1
Crystal structure of the Pumilio-Nos-hunchback RNA complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-04-24 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.00 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 137.007, 137.007, 221.401 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.325 - 3.701 |
R-factor | 0.2679 |
Rwork | 0.264 |
R-free | 0.30020 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3h3d 3alr |
RMSD bond length | 0.003 |
RMSD bond angle | 0.605 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.10_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.760 |
High resolution limit [Å] | 3.700 | 10.020 | 3.700 |
Rmerge | 0.128 | 0.074 | 0.747 |
Rmeas | 0.135 | ||
Rpim | 0.042 | ||
Total number of observations | 154091 | ||
Number of reflections | 13652 | ||
<I/σ(I)> | 5.2 | ||
Completeness [%] | 99.9 | 99.1 | 100 |
Redundancy | 11.3 | 9.1 | 11 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 1.1 M ammonium sulfate, 0.1 M MES, pH 5.6 |