5KKC
l-lactate dehydrogenase from rabbit muscle with the inhibitor 6DHNAD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-05-20 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.9795 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 63.602, 126.085, 84.237 |
Unit cell angles | 90.00, 99.94, 90.00 |
Refinement procedure
Resolution | 39.408 - 1.859 |
R-factor | 0.1704 |
Rwork | 0.170 |
R-free | 0.21120 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4i9h |
RMSD bond length | 0.011 |
RMSD bond angle | 1.145 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX (1.10_2155) |
Refinement software | PHENIX ((1.10_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.410 | 1.890 |
High resolution limit [Å] | 1.860 | 1.860 |
Rmerge | 0.066 | 0.574 |
Number of reflections | 108172 | |
<I/σ(I)> | 11.8 | 2 |
Completeness [%] | 98.7 | 93.2 |
Redundancy | 3.4 | 3.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291 | 0.1 M Tris, pH 7.5, 0.08 M sodium acetate, 14% PEG 8,000 |