Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5KF6

Structure of proline utilization A from Sinorhizobium meliloti complexed with L-tetrahydrofuroic acid and NAD+ in space group P21

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 4.2.2
Synchrotron siteALS
Beamline4.2.2
Temperature [K]100
Detector technologyCMOS
Collection date2014-03-21
DetectorRDI CMOS_8M
Wavelength(s)1.00
Spacegroup nameP 1 21 1
Unit cell lengths101.400, 102.332, 125.909
Unit cell angles90.00, 106.53, 90.00
Refinement procedure
Resolution51.376 - 1.700
R-factor0.192
Rwork0.190
R-free0.22190
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1tj1 3haz
RMSD bond length0.007
RMSD bond angle0.898
Data reduction softwareXDS
Data scaling softwareAimless (0.2.17)
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10.1_2155))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]60.35060.3501.730
High resolution limit [Å]1.7009.3101.700
Rmerge0.0660.0290.460
Number of reflections265575
<I/σ(I)>13.3
Completeness [%]98.381.290.3
Redundancy3.63.22.7
CC(1/2)0.998
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52950.1 M Hepes at pH 7.5, 0.1 M ammonium sulfate, 0.1 M lithium sulfate monohydrate, 50 mM MgCl2, and 25% (w/v) PEG 3350

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon