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5KC9

Crystal structure of the amino-terminal domain (ATD) of iGluR Delta-1 (GluD1)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2012-04-28
DetectorDECTRIS PILATUS 2M
Wavelength(s)0.91730
Spacegroup nameP 32 2 1
Unit cell lengths128.420, 128.420, 153.230
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution59.220 - 2.300
R-factor0.2006
Rwork0.199
R-free0.22730
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5kc8
RMSD bond length0.004
RMSD bond angle0.855
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (dev_1772)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]59.2202.360
High resolution limit [Å]2.3002.300
Rmerge0.0511.222
Number of reflections65080
<I/σ(I)>22.61.9
Completeness [%]99.798.5
Redundancy8.58.7
CC(1/2)1.000
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.1 M MES (2-ethanesulfonic acid)/imidazole pH 6.5, 10% (w/v) polyethylene glycol 8000, 20% (w/v) ethylene glycol, 0.02 M 1,6-hexanediol, 0.02 M (RS)-1,2-propanediol, 0.02 M 1-butanol, 0.02 M 2-propanol, 0.02 M 1,4-butanediol and 0.02 M 1,3-propanediol

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