5KC9
Crystal structure of the amino-terminal domain (ATD) of iGluR Delta-1 (GluD1)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2012-04-28 |
| Detector | DECTRIS PILATUS 2M |
| Wavelength(s) | 0.91730 |
| Spacegroup name | P 32 2 1 |
| Unit cell lengths | 128.420, 128.420, 153.230 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 59.220 - 2.300 |
| R-factor | 0.2006 |
| Rwork | 0.199 |
| R-free | 0.22730 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5kc8 |
| RMSD bond length | 0.004 |
| RMSD bond angle | 0.855 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX (dev_1772) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 59.220 | 2.360 |
| High resolution limit [Å] | 2.300 | 2.300 |
| Rmerge | 0.051 | 1.222 |
| Number of reflections | 65080 | |
| <I/σ(I)> | 22.6 | 1.9 |
| Completeness [%] | 99.7 | 98.5 |
| Redundancy | 8.5 | 8.7 |
| CC(1/2) | 1.000 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1 M MES (2-ethanesulfonic acid)/imidazole pH 6.5, 10% (w/v) polyethylene glycol 8000, 20% (w/v) ethylene glycol, 0.02 M 1,6-hexanediol, 0.02 M (RS)-1,2-propanediol, 0.02 M 1-butanol, 0.02 M 2-propanol, 0.02 M 1,4-butanediol and 0.02 M 1,3-propanediol |






