5KA5
HIV-1 gp41 variant V549E resistance mutation
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-12-10 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.03320 |
Spacegroup name | H 3 |
Unit cell lengths | 40.716, 40.716, 115.521 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 17.998 - 1.800 |
R-factor | 0.1939 |
Rwork | 0.187 |
R-free | 0.22250 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1aik |
RMSD bond length | 0.002 |
RMSD bond angle | 0.321 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 18.000 | 1.850 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.064 | 0.597 |
Number of reflections | 13238 | |
<I/σ(I)> | 6.3 | 1.3 |
Completeness [%] | 99.8 | 99.5 |
Redundancy | 2.8 | 2.8 |
CC(1/2) | 0.997 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 | 291 | 3M Sodium chloride, 0.1M Sodium Acetate Sample concentration: 6 mg/ml |