5K9F
Crystal structure of a NIPSNAP domain protein from Burkholderia xenovorans
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-04-13 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 0.97872 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 95.360, 95.360, 63.170 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.346 - 1.650 |
R-factor | 0.1615 |
Rwork | 0.159 |
R-free | 0.18730 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1vqs |
RMSD bond length | 0.006 |
RMSD bond angle | 0.815 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.690 | |
High resolution limit [Å] | 1.650 | 7.380 | 1.650 |
Rmerge | 0.057 | 0.029 | 0.426 |
Number of reflections | 17813 | ||
<I/σ(I)> | 27.58 | 51.39 | 6.26 |
Completeness [%] | 99.9 | 94.7 | 100 |
Redundancy | 11.9 | ||
CC(1/2) | 0.999 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 290 | MORPHEUS G2: 10% w/v PEG8000, 20% v/v ethylene glycol, 100mM MES/imidazole pH 6.5, 20mM citrate, 20mM tartrate, 20mM acetate, 20mM oxamate, 20mM formate; dc; protein 9.94mg/mL; fsu3-9 |