5K7E
The structure of pistol ribozyme, soaked with Mn2+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-03-22 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.7712 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 55.986, 55.986, 89.460 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.500 - 3.270 |
Rwork | 0.240 |
R-free | 0.29000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5k7d |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 89.500 | 3.530 |
High resolution limit [Å] | 3.270 | 3.270 |
Rpim | 0.589 | |
Number of reflections | 3743 | |
<I/σ(I)> | 9.4 | 1.1 |
Completeness [%] | 95.7 | |
Redundancy | 3.1 | 3.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | containing 0.1 M Na-cacodylate, pH 6.5, 0.05 M Mg(OAc)2 and 32% MPD and supplemented with 150 mM MnCl2 |