5K52
Crystal structures of aldehyde deformylating oxygenase from Limnothrix sp. KNUA012
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-05-14 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9795 |
Spacegroup name | P 43 |
Unit cell lengths | 135.658, 135.658, 71.795 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.010 - 2.400 |
R-factor | 0.2125 |
Rwork | 0.210 |
R-free | 0.26150 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4quw |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.440 |
High resolution limit [Å] | 2.400 | 6.510 | 2.400 |
Rmerge | 0.192 | 0.093 | |
Rmeas | 0.202 | 0.100 | |
Rpim | 0.071 | 0.035 | 0.523 |
Total number of observations | 628548 | ||
Number of reflections | 52273 | ||
<I/σ(I)> | 4.7 | ||
Completeness [%] | 99.2 | 91.5 | 100 |
Redundancy | 12 | 9.4 | 12.9 |
CC(1/2) | 0.990 | 0.654 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 296 | Bis-Tris propane, sodium chloride |