5K3M
Crystal structure of Retinoic acid receptor-related orphan receptor (ROR) gamma ligand binding domain complex with UUA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-05-17 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9793 |
Spacegroup name | P 61 |
Unit cell lengths | 89.702, 89.702, 153.793 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 34.670 - 2.894 |
R-factor | 0.2675 |
Rwork | 0.265 |
R-free | 0.29500 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.903 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.950 |
High resolution limit [Å] | 2.900 | 7.860 | 2.900 |
Rmerge | 0.101 | 0.078 | 0.718 |
Total number of observations | 84240 | ||
Number of reflections | 15621 | ||
<I/σ(I)> | 10.4 | ||
Completeness [%] | 99.7 | 95.1 | 98.8 |
Redundancy | 5.4 | 5.1 | 3.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 289 | 0.4M Potassium sodium tartrate tetrahydrate |