5K0T
Crystal structure of methionyl-tRNA synthetase MetRS from Brucella melitensis in complex with inhibitor Chem 1415
Replaces: 4PPWExperimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-01-29 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.97872 |
Spacegroup name | P 1 |
Unit cell lengths | 45.160, 99.650, 104.300 |
Unit cell angles | 110.46, 88.09, 99.72 |
Refinement procedure
Resolution | 50.000 - 2.600 |
R-factor | 0.258 |
Rwork | 0.257 |
R-free | 0.28600 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 4LNE |
RMSD bond length | 0.008 |
RMSD bond angle | 1.183 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.670 | |
High resolution limit [Å] | 2.600 | 11.630 | 2.600 |
Rmerge | 0.075 | 0.027 | 0.470 |
Number of reflections | 49660 | ||
<I/σ(I)> | 10.12 | 27.6 | 2.07 |
Completeness [%] | 96.0 | 90.8 | 97.5 |
Redundancy | 2.4 | 2.4 | |
CC(1/2) | 0.994 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 290 | BrabA.10201.a.A1.PW37326 at 21.4 mg/ml was mixed 1:1 with PACT(c2): 100 mM PCB buffer, pH=5.0, 25% (w/v) PEG-1500, cryoprotected with 20% ethylene glycol |