5JY5
Crystal structure of Thioredoxin 1 from Cryptococcus neoformans at 1.8 Angstroms resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS BEAMLINE W01B-MX2 |
Synchrotron site | LNLS |
Beamline | W01B-MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-11-04 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.2398 |
Spacegroup name | P 64 2 2 |
Unit cell lengths | 110.706, 110.706, 91.763 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 95.870 - 1.800 |
R-factor | 0.15826 |
Rwork | 0.156 |
R-free | 0.19549 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2j23 |
RMSD bond length | 0.023 |
RMSD bond angle | 2.189 |
Data reduction software | DENZO (HKL-2000_704y) |
Data scaling software | SCALEPACK (HKL-2000_704y) |
Phasing software | PHASER (7.0.004) |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 25.000 | 1.860 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.092 | 0.581 |
Number of reflections | 31224 | |
<I/σ(I)> | 52.9 | 6.2 |
Completeness [%] | 100.0 | 100 |
Redundancy | 37.1 | 34.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.7 | 294 | 1.6 M ammonium sulfate, 0.02 M tris hydrochloride |