5JW5
Structure of MEDI8852 Fab Fragment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-11-21 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97941 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 65.220, 109.920, 139.890 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 86.430 - 1.900 |
R-factor | 0.188 |
Rwork | 0.187 |
R-free | 0.21710 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3HOT (chain B) 4KMT (chain L) |
RMSD bond length | 0.013 |
RMSD bond angle | 1.530 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0124) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 86.430 | 1.950 | |
High resolution limit [Å] | 1.900 | 8.500 | 1.900 |
Rmerge | 0.098 | 0.039 | 0.745 |
Number of reflections | 77785 | ||
<I/σ(I)> | 10 | 25.59 | 2.41 |
Completeness [%] | 97.3 | 83.3 | 98.4 |
Redundancy | 4.1 | ||
CC(1/2) | 0.995 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 20% PEG3350, 0.2 M Ammonium Dihydrogen Phosphate, seeded from crystals obtained from 18% PEG8000, 0.1 M Sodium Cacodylate pH 6.5 and 0.2 M Calcium Acetate |