5JUC
Crystal structure of glucosyl-3-phosphoglycerate synthase from Mycobacterium tuberculosis in complex with Mn2+, uridine-diphosphate (UDP) and glucosyl-3-phosphoglycerate (GPG) - GpgS*GPG*UDP*Mn2+_2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-02-27 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97933 |
Spacegroup name | I 41 |
Unit cell lengths | 99.434, 99.434, 126.785 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 70.310 - 2.800 |
R-factor | 0.1921 |
Rwork | 0.191 |
R-free | 0.21790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4y6n |
RMSD bond length | 0.006 |
RMSD bond angle | 0.734 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((dev_2219: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 70.320 | 2.641 |
High resolution limit [Å] | 2.550 | 2.550 |
Rmerge | 0.116 | |
Number of reflections | 20094 | |
<I/σ(I)> | 7.94 | 1.15 |
Completeness [%] | 99.0 | 100 |
Redundancy | 6.5 | 6.5 |
CC(1/2) | 0.998 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291 | 14% PEG 8,000, 0.3-0.5 M Li sulfate |