5JSO
Structures of DddQ from Ruegeria lac. Reveal Key Residues for Metal Binding and Catalysis - TRIS bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-08-20 |
Detector | NOIR-1 |
Wavelength(s) | 0.976250 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 46.870, 87.761, 48.900 |
Unit cell angles | 90.00, 93.37, 90.00 |
Refinement procedure
Resolution | 48.816 - 2.000 |
R-factor | 0.1878 |
Rwork | 0.185 |
R-free | 0.23620 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4la2 |
RMSD bond length | 0.013 |
RMSD bond angle | 0.819 |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER |
Refinement software | PHENIX (1.10_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.817 | 48.817 | 2.110 |
High resolution limit [Å] | 2.000 | 6.320 | 2.000 |
Rmerge | 0.029 | 0.220 | |
Rmeas | 0.088 | 0.041 | 0.310 |
Rpim | 0.046 | 0.022 | 0.161 |
Total number of observations | 97454 | 3157 | 14047 |
Number of reflections | 26468 | ||
<I/σ(I)> | 14.1 | 28.3 | 5.1 |
Completeness [%] | 99.0 | 97.9 | 99 |
Redundancy | 3.7 | 3.7 | 3.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1 M MES pH 6.0, 0.2 M LiCl, 20% PEG 6000 |