5JRD
E. coli Hydrogenase-1 variant P508A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-07-04 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.92 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 94.691, 98.589, 185.373 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 92.690 - 1.200 |
R-factor | 0.12171 |
Rwork | 0.121 |
R-free | 0.14052 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | pdb 5a4m |
RMSD bond length | 0.019 |
RMSD bond angle | 1.894 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 98.600 | 1.220 |
High resolution limit [Å] | 1.200 | 1.200 |
Rmerge | 0.130 | |
Number of reflections | 536585 | |
<I/σ(I)> | 7.3 | 1.6 |
Completeness [%] | 100.0 | 99.5 |
Redundancy | 7.2 | 7 |
CC(1/2) | 0.995 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 293 | Peg 3350, 50 mM Bis-tris, 200 mM LiSO4, 150 mM NaCl |